CERTH consist of the five (5) Institutes and the Central Directorate and is governed by its Board of Directors.

Organisational Chart of CERTH
Board of directors
- Evangelos Bekiaris, Chairman and Director of Central Directorate
- Maria Panou, Vice-Director of HIT
- Spyridon Voutetakis, Member & Director of CPERI
- Ioannis Kompatsiaris, Member & Director of ITI
- Dionysios Bochtis, Member & Director of IBO
- Anastasia Chatzidimitriou, Member & Director of INAB
- Dionysios Kechagias, Member & Representative of Researchers and Staff Research Scientists (ELE)
- Asimakopoulou Akrivi, Member & Representative of the Special Scientific-Technical, Technical, Administrative and Support Staff
- Panagiotis Ketikidis, Member & Representative of the Ministry of Development